The detailed information of tRNA gene sequence


Sequence ID>WENV170690640
Genome IDLFRM01353467
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3392
End posion on genome 3319
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgcactaaaa
tRNA gene sequence 
GGCGCAGTAGCAAAGCGGTTATGCAGCGGATTGCAAATCCGTCCAGAGCGGTTCGACTCC
GCTCTGCGCCTCCA
Downstream region at tRNA end position 
gtcaaagact
Secondary structure (Cloverleaf model)
>WENV170690640	Cys	GCA
                   a      TCCA gtcaaagact
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T C
                    T     T C G C C     A
        G A        A      | | | | |     G
      C     A A C G       A G C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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