The detailed information of tRNA gene sequence


Sequence ID>WENV170690668
Genome IDLFRM01355320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 174
End posion on genome 249
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccatataaat
tRNA gene sequence 
GCCGGAATAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGCGGGTTCAAGT
CCTGCTTCCGGCACCA
Downstream region at tRNA end position 
tcaagaggtg
Secondary structure (Cloverleaf model)
>WENV170690668	Thr	TGT
                   t      ACCA tcaagaggtg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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