The detailed information of tRNA gene sequence


Sequence ID>WENV170690688
Genome IDLFRM01355975
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 346
End posion on genome 421
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ctgtatttat
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCGCTGGTTCGATT
CCGGCTCTGGGCACCA
Downstream region at tRNA end position 
tgttttttat
Secondary structure (Cloverleaf model)
>WENV170690688	Phe	GAA
                   t      ACCA tgttttttat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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