The detailed information of tRNA gene sequence


Sequence ID>WENV170690697
Genome IDLFRM01356505
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5216
End posion on genome 5291
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gttttgaaat
tRNA gene sequence 
GCGGAAATAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGAGTTCGAGT
CTCGTTTTCCGCTCCA
Downstream region at tRNA end position 
gtaaacgaga
Secondary structure (Cloverleaf model)
>WENV170690697	Gly	GCC
                   t      TCCA gtaaacgaga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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