The detailed information of tRNA gene sequence


Sequence ID>WENV170690757
Genome IDLFRM01359875
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6040
End posion on genome 6111
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aatcaaaagt
tRNA gene sequence 
GCCAAGATGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATTAAACTCCGGTTCGAATC
CGGACCTTGGCTtct
Downstream region at tRNA end position 
ttaaaatctc
Secondary structure (Cloverleaf model)
>WENV170690757	Cys	GCA
                   t      Ttct ttaaaatctc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     A   C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     TAAAC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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