The detailed information of tRNA gene sequence


Sequence ID>WENV170690769
Genome IDLFRM01360188
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23328
End posion on genome 23406
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tccagtctgT
tRNA gene sequence 
GGGCTTGTGGCCTAGCCAGGATATGGCGTCAGCCTCCTAAGCTGAATGCCGGGGGTTCAA
ATCCCCCCAAGCCCGTCC
Downstream region at tRNA end position 
gttttcccgt
Secondary structure (Cloverleaf model)
>WENV170690769	Arg	CCT
                   T      GTCC gttttcccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C C C C C     A
    C C G A        G      | | | | |     A
  A         T C C G       G G G G G     C
  G           | | |                 T T
  G         T G G C
    A T A          G     ATGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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