The detailed information of tRNA gene sequence


Sequence ID>WENV170690770
Genome IDLFRM01360188
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20851
End posion on genome 20777
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgtgcaatgc
tRNA gene sequence 
GCTGCTATAGTGTAGACCGGCCAATCATGTAGGACTCTCACTCCTACGACTGGGGTTCAA
ATCCCCATAGCAGCAttc
Downstream region at tRNA end position 
tgttttcaaa
Secondary structure (Cloverleaf model)
>WENV170690770	Glu	CTC
                   c      Attc tgttttcaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C A G A        A      | | | | |     A
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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