The detailed information of tRNA gene sequence


Sequence ID>WENV170690771
Genome IDLFRM01360294
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 17285
End posion on genome 17201
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cttctttgtt
tRNA gene sequence 
GCGAGCGTGGCGGAATTGGTAGACGCACTGGATTTAGGTTCCAGCGCCGAAAGGTGTGAG
AGTTCGAGTCTCTCCGCTCGCACCA
Downstream region at tRNA end position 
taagaaatca
Secondary structure (Cloverleaf model)
>WENV170690771	Leu	TAG
                   t      ACCA taagaaatca
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGAAAGGTGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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