The detailed information of tRNA gene sequence


Sequence ID>WENV170690937
Genome IDLFRM01371863
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 112
End posion on genome 37
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcaatgttct
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gctttataat
Secondary structure (Cloverleaf model)
>WENV170690937	Trp	CCA
                   t      GCCA gctttataat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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