The detailed information of tRNA gene sequence


Sequence ID>WENV170690953
Genome IDLFRM01372706
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1137
End posion on genome 1066
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtcagagtga
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTTACAACGAGGTGGTCACGAGTTCGAATC
TCGTCCGGCCCAtta
Downstream region at tRNA end position 
gttctattta
Secondary structure (Cloverleaf model)
>WENV170690953	Val	TAC
                   a      Atta gttctattta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      G     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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