The detailed information of tRNA gene sequence


Sequence ID>WENV170690954
Genome IDLFRM01372706
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1043
End posion on genome 971
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatccatag
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTCACAACGAGGTGGTCACGAGTTCGAATC
TCGTCCGGCCCACtg
Downstream region at tRNA end position 
gaccttttat
Secondary structure (Cloverleaf model)
>WENV170690954	Val	CAC
                   g      ACtg gaccttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      G     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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