The detailed information of tRNA gene sequence


Sequence ID>WENV170690957
Genome IDLFRM01372925
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 133534
End posion on genome 133610
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aacaatgcat
tRNA gene sequence 
GGGCCCGTAGCTTAGTCAGGCAGAGCGATGGACTCTTAATCCATAGGCCGGGGGTTCAAA
TCCCTTCGGGCCCGCTA
Downstream region at tRNA end position 
ctatcatctt
Secondary structure (Cloverleaf model)
>WENV170690957	Lys	CTT
                   t      GCTA ctatcatctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        A      + + | | |     A
    C       T T C G       G G G G G     C
    A       + | | |                 T T
    G       G A G C
      G C A        G     AGGCC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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