The detailed information of tRNA gene sequence


Sequence ID>WENV170690958
Genome IDLFRM01372976
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 140
End posion on genome 67
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaagaagaac
tRNA gene sequence 
GGTTCCTTGGCCAAGTGGTAAGGCAACAGACTGCAACTCTGTGATCATCGGTTCAAATCC
GATAGGAACCTCCA
Downstream region at tRNA end position 
gtaatgggga
Secondary structure (Cloverleaf model)
>WENV170690958	Cys	GCA
                   c      TCCA gtaatgggga
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
        G A        G      | | | | |     A
      T     A C C G       A T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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