The detailed information of tRNA gene sequence


Sequence ID>WENV170690987
Genome IDLFRM01374320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 448
End posion on genome 522
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
atgagtgcgc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCCACCTTTACACGGTGGATGTCGGGGGTTCGAA
TCCCTCATCGCCCACtt
Downstream region at tRNA end position 
ccccgccacg
Secondary structure (Cloverleaf model)
>WENV170690987	Val	TAC
                   c      ACtt ccccgccacg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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