The detailed information of tRNA gene sequence


Sequence ID>WENV170690999
Genome IDLFRM01374754
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14438
End posion on genome 14363
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agaaggtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGTGGTCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCAAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
tattttcaga
Secondary structure (Cloverleaf model)
>WENV170690999	Glu	TTC
                   t      GCCA tattttcaga
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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