The detailed information of tRNA gene sequence


Sequence ID>WENV170691011
Genome IDLFRM01375088
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1924
End posion on genome 1838
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnngacat
tRNA gene sequence 
GCCCAGGTGGTGAAATTGGTAGACACGCTAGCTTCAGGTGCTAGTGGCTTCACGGCCGTG
GAAGTTCGAGTCTTCTCCTGGGCACCA
Downstream region at tRNA end position 
aattaaagga
Secondary structure (Cloverleaf model)
>WENV170691011	Leu	CAG
                   t      ACCA aattaaagga
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       A G T G       G G A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCTTCACGGCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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