The detailed information of tRNA gene sequence


Sequence ID>WENV170691034
Genome IDLFRM01376324
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 108
End posion on genome 184
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaaatcttt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGAA
TCCTATCGCCCCGACCA
Downstream region at tRNA end position 
aatttctcaa
Secondary structure (Cloverleaf model)
>WENV170691034	Pro	TGG
                   t      ACCA aatttctcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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