The detailed information of tRNA gene sequence


Sequence ID>WENV170691051
Genome IDLFRM01377927
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1856
End posion on genome 1781
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgcctttgtt
tRNA gene sequence 
GGCCTGGTAGCTCAGTCGGTAGAGCAGCGGATTGAAAATCCGCGTGTCGGTGGTTCGATT
CCGCCCCAGGCCACCA
Downstream region at tRNA end position 
ctctgctgtt
Secondary structure (Cloverleaf model)
>WENV170691051	Phe	GAA
                   t      ACCA ctctgctgtt
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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