The detailed information of tRNA gene sequence


Sequence ID>WENV170691055
Genome IDLFRM01378053
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2197
End posion on genome 2122
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
gacagcgaat
tRNA gene sequence 
GCGCCCGTAGCTCAACGGATAGAGCATCTGACTACGGATCAGAAGGTTAGGGGTTCGAAT
CCCTTCGGGCGCACCA
Downstream region at tRNA end position 
catttccccg
Secondary structure (Cloverleaf model)
>WENV170691055	Arg	ACG
                   t      ACCA catttccccg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       A G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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