The detailed information of tRNA gene sequence


Sequence ID>WENV170691128
Genome IDLFRM01381489
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 254
End posion on genome 329
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ataagtatcc
tRNA gene sequence 
GGGATTATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACAGGTTCGAGC
CCTGTTAATCCCACCA
Downstream region at tRNA end position 
gtgcaaaagc
Secondary structure (Cloverleaf model)
>WENV170691128	Val	TAC
                   c      ACCA gtgcaaaagc
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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