The detailed information of tRNA gene sequence


Sequence ID>WENV170691134
Genome IDLFRM01381629
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 86
End posion on genome 161
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
accattgttt
tRNA gene sequence 
GCCGACTTAGCTCAATTGGTAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCAAGT
CCTCTAGTCGGCACCA
Downstream region at tRNA end position 
tnntctagtc
Secondary structure (Cloverleaf model)
>WENV170691134	Thr	TGT
                   t      ACCA tnntctagtc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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