The detailed information of tRNA gene sequence


Sequence ID>WENV170691138
Genome IDLFRM01381950
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 291
End posion on genome 367
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagtagtgct
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGCCTAACATGCCTGCCTGTCACGCAGGTGATCGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttaatgccgc
Secondary structure (Cloverleaf model)
>WENV170691138	Asp	GTC
                   t      GCCA ttaatgccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     TGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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