The detailed information of tRNA gene sequence


Sequence ID>WENV170691153
Genome IDLFRM01382374
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1406
End posion on genome 1494
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caccaaaaat
tRNA gene sequence 
GGAGGAGTACCCAAGTGGCTGAAGGGACTGGTCTTGAAAACCAGCAGACGTGAGAGCGTG
CGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
tttatttaat
Secondary structure (Cloverleaf model)
>WENV170691153	Ser	TGA
                   t      GCCA tttatttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CAGACGTGAGAGCGTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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