The detailed information of tRNA gene sequence


Sequence ID>WENV170691179
Genome IDLFRM01383608
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1473
End posion on genome 1545
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctgcgtatat
tRNA gene sequence 
TCCTCGATAGCTCAATGGTAGAGCACTCGGCTGTTAACCGAGTTGTTGTAGGTTCGAGCC
CTACTCGGGGAGCtg
Downstream region at tRNA end position 
cgaagtcttt
Secondary structure (Cloverleaf model)
>WENV170691179	Asn	GTT
                   t      GCtg cgaagtcttt
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          C G
                    T     C A T C C     A
        A A        A      | | | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TTGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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