The detailed information of tRNA gene sequence


Sequence ID>WENV170691193
Genome IDLFRM01384180
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 396
End posion on genome 322
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tctgagaggt
tRNA gene sequence 
TCCTCAGTAGCTCAATGGCAGAGCGGCCGGCTGTTAACCGGTAGGTTGCAGGTTCGAGTC
CTGCCTGGGGAGCCA
Downstream region at tRNA end position 
atttatttga
Secondary structure (Cloverleaf model)
>WENV170691193	Asn	GTT
                   t      GCCA atttatttga
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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