The detailed information of tRNA gene sequence


Sequence ID>WENV170691197
Genome IDLFRM01384362
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 67238
End posion on genome 67156
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtcaaaaaac
tRNA gene sequence 
GCAGGGGTGCCCGAGCGGCCAAAGGGGGAGGACTTAAGATCCTCTGGCGCAGGCCTTCAA
GGGTTCGAATCCCTTCCCCTGCAttt
Downstream region at tRNA end position 
gtatatgcct
Secondary structure (Cloverleaf model)
>WENV170691197	Leu	TAA
                   c      Attt gtatatgcct
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C C       A A G G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCGCAGGCCTTC
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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