The detailed information of tRNA gene sequence


Sequence ID>WENV170691221
Genome IDLFRM01386119
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2292
End posion on genome 2217
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcttatttga
tRNA gene sequence 
TCCCCGATAGCTCAGACGGTAGAGCGACGGACTGTTAATCCGCAGGTCACTGGTTCGATC
CCAGTTCGGGGAGCCA
Downstream region at tRNA end position 
aatttaaaat
Secondary structure (Cloverleaf model)
>WENV170691221	Asn	GTT
                   a      GCCA aatttaaaat
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          C T
                    T     T G A C C     A
      A G A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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