The detailed information of tRNA gene sequence


Sequence ID>WENV170691236
Genome IDLFRM01387986
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 189
End posion on genome 264
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tccgcacgta
tRNA gene sequence 
GGGCCGATAGCTCAGCTGGGAGAGCGCTGCGTTCGCAATGCAGAGGTCGAGGGTTCGATC
CCCTTTCGGTCCACCA
Downstream region at tRNA end position 
tacacaaggg
Secondary structure (Cloverleaf model)
>WENV170691236	Ala	CGC
                   a      ACCA tacacaaggg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          C T
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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