The detailed information of tRNA gene sequence


Sequence ID>WENV170691238
Genome IDLFRM01388157
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 15642
End posion on genome 15717
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cagtttattt
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGCACGTGGTTTGGGACCATGGGGCCGGGGGTTCAAGT
CCTCTCACCCCGACCA
Downstream region at tRNA end position 
acgggacagg
Secondary structure (Cloverleaf model)
>WENV170691238	Pro	TGG
                   t      ACCA acgggacagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | + | |     A
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGCC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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