The detailed information of tRNA gene sequence


Sequence ID>WENV170691266
Genome IDLFRM01388966
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 608
End posion on genome 535
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gagacggcgc
tRNA gene sequence 
GCGGATGTAGCTCAATGGTAGAGCCTCAGTCTTCCAAACTGATTACGCGGGTTCGATTCC
CGTCATCCGCTCCG
Downstream region at tRNA end position 
ctaaaacggc
Secondary structure (Cloverleaf model)
>WENV170691266	Gly	TCC
                   c      TCCG ctaaaacggc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TTAC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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