The detailed information of tRNA gene sequence


Sequence ID>WENV170691281
Genome IDLFRM01390414
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1877
End posion on genome 1801
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccatttgt
tRNA gene sequence 
GGGTCGTTAGCTCAGCTGGTTAGAGCACTCGGCTCATAACCGAGTGGTCGAAGGTTCGAG
TCCTTCACGACCCACCA
Downstream region at tRNA end position 
ctttataaaa
Secondary structure (Cloverleaf model)
>WENV170691281	Met	CAT
                   t      ACCA ctttataaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     C T T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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