The detailed information of tRNA gene sequence


Sequence ID>WENV170691292
Genome IDLFRM01391235
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 237
End posion on genome 310
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gagtaagcat
tRNA gene sequence 
GGTTCCTTAGCCAAGTGGTAAGGCAATAGACTGCAACTCTGTGATCGTCGGTTCGAATCC
GATAGGAACCTCCA
Downstream region at tRNA end position 
agtattgggg
Secondary structure (Cloverleaf model)
>WENV170691292	Cys	GCA
                   t      TCCA agtattgggg
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
        G A        A      + | | | |     G
      T     A C C G       G T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    A - T
                    T + G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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