The detailed information of tRNA gene sequence


Sequence ID>WENV170691298
Genome IDLFRM01391235
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 867
End posion on genome 955
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttacttatat
tRNA gene sequence 
GGAGGAGTACCCAAGTGGCTGAAGGGACTGGTCTTGAAAACCAGCAGACGGGCGACCGTG
CGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
attaagtttt
Secondary structure (Cloverleaf model)
>WENV170691298	Ser	TGA
                   t      GCCA attaagtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     CAGACGGGCGACCGTGC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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