The detailed information of tRNA gene sequence


Sequence ID>WENV170691351
Genome IDLFRM01393764
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 141
End posion on genome 217
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgctccatgt
tRNA gene sequence 
GCGCCTGTAGCTCAGCAGGATAGAGCAACTGCCTTCTAAGCAGTGGGTCAGGAGTTCGAA
TCTCTTCAGGCGCGCCA
Downstream region at tRNA end position 
gtatggtggg
Secondary structure (Cloverleaf model)
>WENV170691351	Arg	TCT
                   t      GCCA gtatggtggg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C T C     A
      C G A        A      | + | | |     G
    A       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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