The detailed information of tRNA gene sequence


Sequence ID>WENV170691389
Genome IDLFRM01394940
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1653
End posion on genome 1729
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcttctgctt
tRNA gene sequence 
GTCCTGATAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGGGTTCGAA
TCCCTCTCAGGACGCCA
Downstream region at tRNA end position 
ttggccccga
Secondary structure (Cloverleaf model)
>WENV170691389	Arg	TCT
                   t      GCCA ttggccccga
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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