The detailed information of tRNA gene sequence


Sequence ID>WENV170691420
Genome IDLFRM01396679
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4718
End posion on genome 4644
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
caattcagat
tRNA gene sequence
GGCCCATTCGTCTATCGGTTAGGACGCCAGATTTTCATTCTGGAAAGAGGGGTTCGACTC
CCCTATGGGCTACAA
Downstream region at tRNA end position
aaacaaaaca
Secondary structure (Cloverleaf model)
>WENV170691420	Glu	TTC
                   t      ACAA aaacaaaaca
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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