The detailed information of tRNA gene sequence


Sequence ID>WENV170691421
Genome IDLFRM01396872
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21745
End posion on genome 21822
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attacagagT
tRNA gene sequence 
GGGTCTGTGGCTTAGCCAGGATATAGCGCCGGGCTTCTAACCCGGATGCCGGGGGTTCGA
ATCCCTCCAGGCCCGTCg
Downstream region at tRNA end position 
attttaacgc
Secondary structure (Cloverleaf model)
>WENV170691421	Arg	TCT
                   T      GTCg attttaacgc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  A         T T C G       G G G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ATGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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