The detailed information of tRNA gene sequence


Sequence ID>WENV170691443
Genome IDLFRM01397392
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5063
End posion on genome 4987
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttcatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCATCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
tggctccata
Secondary structure (Cloverleaf model)
>WENV170691443	Met	CAT
                   t      ACCA tggctccata
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      |   | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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