The detailed information of tRNA gene sequence


Sequence ID>WENV170691468
Genome IDLFRM01398565
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 872
End posion on genome 797
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tctttcggtt
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCGCGTTCGAGT
CGCGCACGACCCACCA
Downstream region at tRNA end position 
acccgaattc
Secondary structure (Cloverleaf model)
>WENV170691468	Lys	TTT
                   t      ACCA acccgaattc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     C G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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