The detailed information of tRNA gene sequence


Sequence ID>WENV170691469
Genome IDLFRM01398637
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10684
End posion on genome 10610
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGAAGTAGTTCAGCGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCAAGTC
CCGTCTTCCGCTCCA
Downstream region at tRNA end position 
gaccaggcgg
Secondary structure (Cloverleaf model)
>WENV170691469	Gly	GCC
                   n      TCCA gaccaggcgg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T G C C C     A
        G A        A      + | | | |     A
      C     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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