The detailed information of tRNA gene sequence


Sequence ID>WENV170691538
Genome IDLFRM01402081
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 45915
End posion on genome 45840
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCCTCATCGTCTAGTGGTCTAGGACACCAGGTTTTCATCCTGGCGGCAGGGGTTCAAAT
CCCCTTGAGGGTGCCA
Downstream region at tRNA end position 
ttttttatgg
Secondary structure (Cloverleaf model)
>WENV170691538	Glu	TTC
                   n      GCCA ttttttatgg
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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