The detailed information of tRNA gene sequence


Sequence ID>WENV170691544
Genome IDLFRM01402271
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10587
End posion on genome 10662
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcaatgttat
tRNA gene sequence 
GCTACTGTGGCTCAGTTGGTAGAGCAGCTGATTCGTAATCAGCAGGTCGCCGGTTCGAGT
CCGGCCAGTAGCTCCA
Downstream region at tRNA end position 
aataccctct
Secondary structure (Cloverleaf model)
>WENV170691544	Thr	CGT
                   t      TCCA aataccctct
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A
                     G - C          T G
                    T     C G G C C     A
      T G A        G      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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