The detailed information of tRNA gene sequence


Sequence ID>WENV170691568
Genome IDLFRM01403103
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 517
End posion on genome 442
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tggacggaca
tRNA gene sequence 
GGGCGGTTAGCTCAGCTGGGAGAGCATCGGCCTTACAAGCCGAGGGTCATAGGTTCGATC
CCTGTACCGCCCACCA
Downstream region at tRNA end position 
caactgaaat
Secondary structure (Cloverleaf model)
>WENV170691568	Val	TAC
                   a      ACCA caactgaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G T C C     A
      C G A        A      | + | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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