The detailed information of tRNA gene sequence


Sequence ID>WENV170691574
Genome IDLFRM01403355
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 77
End posion on genome 152
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atattatttt
tRNA gene sequence 
GGGGGCTTAGCTCAGATGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTAGCCTCCACCA
Downstream region at tRNA end position 
atttaaaaat
Secondary structure (Cloverleaf model)
>WENV170691574	Ala	TGC
                   t      ACCA atttaaaaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     T C G C C     A
      A G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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