The detailed information of tRNA gene sequence


Sequence ID>WENV170691582
Genome IDLFRM01403676
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 31607
End posion on genome 31691
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aatgatatac
tRNA gene sequence 
GGAGGGATACCCAAGAGGCCAAAGGGGGCAGACTGTAAATCTGTTGTCAGTGACTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
tcgatttgtc
Secondary structure (Cloverleaf model)
>WENV170691582	Tyr	GTA
                   c      ACCA tcgatttgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T A C C     A
      A G A        A      | | | | |     G
    G       A C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGTCAGTGACTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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