The detailed information of tRNA gene sequence


Sequence ID>WENV170691584
Genome IDLFRM01403798
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 308
End posion on genome 224
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
atcttaatat
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGGGCAGACTGTAAATCTGCTGGCACAGCCTTCGAT
GGTTCGAATCCATCTCCCTCCACCA
Downstream region at tRNA end position 
ttctgctttt
Secondary structure (Cloverleaf model)
>WENV170691584	Tyr	GTA
                   t      ACCA ttctgctttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGGCACAGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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