The detailed information of tRNA gene sequence


Sequence ID>WENV170691602
Genome IDLFRM01405463
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 756
End posion on genome 830
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gtaatgacgt
tRNA gene sequence 
TCCGCGATAGCTCAATGGTGGAGCACTCGGCTGTTAACCGATAGGTTGGAGGTTCGAGTC
CTCTTCGCGGAGCCA
Downstream region at tRNA end position 
tttttttatt
Secondary structure (Cloverleaf model)
>WENV170691602	Asn	GTT
                   t      GCCA tttttttatt
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T G
                    T     T C T C C     A
        A A        A      + | | | |     G
      T     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        T G        A     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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