The detailed information of tRNA gene sequence


Sequence ID>WENV170691612
Genome IDLFRM01405764
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20
End posion on genome 93
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgatgcatg
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGCTATGACGTCGCCTTCACACGGCGGAGGTCTCGAGTTCGAA
TCTCGACGAGCCCAtga
Downstream region at tRNA end position 
tttctccttc
Secondary structure (Cloverleaf model)
>WENV170691612	Val	CAC
                   g      Atga tttctccttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A G C T C     A
      T G A        G      | | | | |     G
    T       T C T G       T C G A G     C
    G         | | |                 T T
    G       T G A C
      C T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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