The detailed information of tRNA gene sequence


Sequence ID>WENV170691655
Genome IDLFRM01408691
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4290
End posion on genome 4216
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ctgattgcgt
tRNA gene sequence 
GTCCCTGTAGTTCAATGGATAGAACGGGTTCCTCCTAAGAATCAGATCCAGGTTCGATTC
CTGGTGGGGACGCCA
Downstream region at tRNA end position 
tcacaccgta
Secondary structure (Cloverleaf model)
>WENV170691655	Arg	CCT
                   t      GCCA tcacaccgta
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     G + T          T T
                    T     G G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       C C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AGAT
                    G - C
                    G + T
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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