The detailed information of tRNA gene sequence


Sequence ID>WENV170691688
Genome IDLFUF01003438
Search identical group
Phylum/Class[LFUF] hypersaline lake metagenome; virus filtrate of water collected from the Namib Desert Hosabes playa
Species
Start position on genome 1612
End posion on genome 1534
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaccttgaT
tRNA gene sequence 
AGCGGGGTAGTTCAGCCAGGAGTGAGCGCCGGGCTCATAATCCGGATGCCCTCGGTTCAA
ATCCGAGTCCCGCTAACA
Downstream region at tRNA end position 
acatataaaa
Secondary structure (Cloverleaf model)
>WENV170691688	Met	CAT
                   T      AACA acatataaaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     G A G C C     A
    C C G A        A      | | | | |     A
  A         C T T G       C T C G G     C
  G         | | + |                 T T
  G         G A G C
    A G T          G     ATGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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